Dr. Wily (Mr. Wily) Ah, and then there was Wily. We have known this guy since the very beginning of the Rockman sagas, and he's always the one causing trouble. Well he's back at it again, and this time he's using Net Navi's to do his bidding instead of Robots. There is a lot of debate in whether this storyline takes place before the actual Rockman storyline, or whether it is just a new and original storyline all together. As for me, I believe it is something all new. Wily is, of course, the head of the World 3 organization. All the members take their orders from him. After the fall of World 3 at the end of Season 1, he moves on to operate Gospel from the Shadows. Of course, the fact that he is even involved with Gospel isn't shown until the very end, during the climax. However, after Gospel is defeated, he is once again left powerless. For reasons unknown, after his fall from power, he turns to the side of good (well, mostly). He even aids Yuuichirou indirectly in improving the system of Dimensional Areas during the beginning of Stream.

I wonder why Wily has a glass eye? o_o
This character description was made for episodes that I have seen so far. It may be updated as more episodes become available.